CombiMatrix Protonema treatments gmv1.2
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Gene models: v1.2 Phypa
Description:
Expression data of several experimental conditions for Gransden WT protonema in liquid Knop medium (Each experiment has 3 replicates).
The data are derived from the CombiMatrix microarray platform and all samples were normalized by a median value of 12.
Transition experiments from pH 5.8 to pH4.5 were published in
Hiss et al., 2014.
The ABA time series experiment was published in Arif et al. 2019.
| Abbreviations | |
|---|---|
| BCD liquid | Blq |
| BCDA (ammonium) liquid | BlqA |
| BCD solid | Bsl |
| BCDA (ammonium) solid | BslA |
| Gibberellin A9 methyl-ester | GA9 |
| hydroponic | hydr |
| Knop liquid | Klq |
| Knop liquid ammonium | KlqA |
| Knop solid | Ksl |
| 12-oxophytodienoic acid | OPDA |
Note: OPDA is a precursor of jasmonic acid.
The next figures represent the available samples in this data set. The color in the colored part of the figures below will be replaced by the expression color (from the white-yellow-orange-red color scale) when using the Expression Viewer.
Gransden WT Protonema - Control pH 5.8
- Protonema - Klq
Gransden WT Protonema - pH 4.5
- Protonema - Klq
Gransden WT Protonema - ABA Control 30min
- Protonema - Klq
Gransden WT Protonema - ABA 30min
- Protonema - Klq
Gransden WT Protonema - ABA 60min
- Protonema - Klq
Gransden WT Protonema - ABA 180min
- Protonema - Klq
Gransden WT Protonema - ABA Control 180min
- Protonema - Klq