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Paste or type a P. patens gene name using the right version for the dataset. The names will be autocompleted as you type (if the gene name exists for the selected dataset). When selecting a new dataset a new example gene will be displayed.
Eg.:
For RNA-seq: Pp3c1_10000V3.1
For Combimatrix: Phypa_100005
For Nimblegen: Pp1s10008_1V6.1

If the gene version from the input gene and the selected dataset are different then, PEATmoss will automatically convert the input gene in the equivalent gene for the dataset gene version. When more than one gene is found, a list will allow to choose which gene to use to display the results.

Please, check out our videos to learn more about it

Please, paste a sequence. Both nucleotide or protein sequences are valid.

Please, paste a list of gene IDs.

• Select the data set you want to query.
  You can find more information about the them following the more info link.
  Read help page for more information.
• Set the minimum correlation value (0.65 - 1.0) to display co-expressed genes with similar expression profiles.
  Read help page for more information.
• Filter the conditions to display: Stage, tissues, treatments, etc. Note that when no conditions are selected for filtering all the samples from the data set will be display.
  Read help page for more information.

• Filter the conditions to display in the results: Tissues, ecotype, treatments, etc. The selected conditions for X and Y axis will be displayed in the columns and rows of the expression cube.
• Note that when no conditions are selected for filtering all the samples from the data set will be display.
  
• Read help page for more information.



Abbreviations
BCD liquid	Blq
BCDA (ammonium) liquid	BlqA
BCD solid	Bsl
BCDA (ammonium) solid	BslA
Gibberellin A9 methyl-ester	GA9
hydroponic	hydr
Knop liquid	Klq
Knop liquid ammonium	KlqA
Knop solid	Ksl
12-oxophytodienoic acid	OPDA

Note: OPDA is a precursor of jasmonic acid.