RNA-seq Protonema treatments gmv3.3

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Gene models: v3.3

Description: Expression data from several experimental conditions for Gransden WT protonema on several media (Each experiment has 3 replicates). Phosphate deficiency time series are unpublished experiments. The rest of the data were published in Perroud et al., 2018

Abbreviations
BCD liquidBlq
BCDA (ammonium) liquidBlqA
BCD solidBsl
BCDA (ammonium) solidBslA
Gibberellin A9 methyl-esterGA9
hydroponichydr
Knop liquidKlq
Knop liquid ammoniumKlqA
Knop solidKsl
12-oxophytodienoic acid OPDA

Note: OPDA is a precursor of jasmonic acid.


The next figures represent the available samples in this data set. The color in the colored part of the figures below will be replaced by the expression color (from the white-yellow-orange-red color scale) when using the Expression Viewer.


Protonema BCD solid - Control ABA

  • Protonema - Bsl

Protonema BCD solid - ABA

  • Protonema - Bsl

Protonema BCD solid - Acetone

  • Protonema - Bsl

Protonema BCD solid - Strigolactone

  • Protonema - Bsl

Protonema BCD solid - Continuous light GA9

  • Protonema - Bsl

Protonema BCD solid - Continuous Light

  • Protonema - Bsl

Protonema BCD solid - Heat Stress

  • Protonema - Bsl

Protonema BCDA - Control OPDA

  • Protonema - BslA

Protonema BCDA - OPDA

  • Protonema - BslA

Protonema BCDA - Glucose Continuous Light

  • Protonema - BslA

Protonema BCDA - Glucose Darkness

  • Protonema - BslA

Protonema BCDA - Glucose UV-B Light

  • Protonema - BslA

Protonema BCDA - Glucose Blue Light

  • Protonema - BslA

Protonema BCDA - Glucose Red Light

  • Protonema - BslA

Protonema BCDA - Glucose Far Red Light

  • Protonema - BslA

Protonema Knop solid - Low Light

  • Protonema - Ksl

Protonema Knop solid - High Light

  • Protonema - Ksl

Protonema Knop liquid - 2 Hours After Light

  • Protonema Klq

Protonema Knop liquid - 2 Hours After Light Ammonium

  • Protonema Klq

Protonema Knop liquid - PO4 Control 0.5 hours

  • Protonema Klq

Protonema Knop liquid - PO4 Control 2 hours

  • Protonema Klq

Protonema Knop liquid - PO4 Control 24 hours

  • Protonema Klq

Protonema Knop liquid - PO4 Deficiency 0.5 hours

  • Protonema Klq

Protonema Knop liquid - PO4 Deficiency 2 hours

  • Protonema Klq

Protonema Knop liquid - PO4 Deficiency 24 hours

  • Protonema Klq